Package: popularitree 0.0.0.9000

popularitree: Subsamples a tree to get popular taxa

Often you want to show a reduced summary tree. Taxa chosen should span all the tree (for example, a tree of mammals should not have just primates) but also be recognizable groups to your audience. This lets you select a final tree size you want, criteria you want to use, and finds the tree that maximizes the criteria.

Authors:Brian O'Meara [aut, cre]

popularitree_0.0.0.9000.tar.gz
popularitree_0.0.0.9000.zip(r-4.7-any)popularitree_0.0.0.9000.zip(r-4.6-any)popularitree_0.0.0.9000.zip(r-4.5-any)
popularitree_0.0.0.9000.tgz(r-4.6-any)popularitree_0.0.0.9000.tgz(r-4.5-any)
popularitree_0.0.0.9000.tar.gz(r-4.7-any)popularitree_0.0.0.9000.tar.gz(r-4.6-any)
popularitree_0.0.0.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
popularitree/json (API)

# Install 'popularitree' in R:
install.packages('popularitree', repos = c('https://bomeara.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bomeara/popularitree/issues

On CRAN:

Conda:

1.70 score 7 exports 76 dependencies

Last updated from:ce3e5899c0. Checks:5 OK, 4 ERROR. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK256
source / vignettesOK344
linux-releaseERROR173
macos-releaseOK158
macos-oldrelOK159
windows-develERROR89
windows-releaseERROR98
windows-oldrelERROR106
wasm-releaseOK143

Exports:generate_samplepopularitreespecies_get_commonspecies_gtrends_popularityspecies_ncbi_common_existstree_compute_measurestree_convert_to_common

Dependencies:anytimeapeaskpassBHcliclustercpp11crayoncrulcurldata.tabledigestdplyrfarverfastmatchgenericsggplot2gluegtablegtrendsRhmshttpcodehttrigraphisobandjsonlitelabelinglatticelifecyclemagrittrMASSMatrixmgcvmimenatservnlmeopensslpermutephangornpicantepillarpkgconfigplyrprettyunitsprogressquadprogR6RColorBrewerRcpprentrezritisrlangrnclrotlrredlistS7scalessolriumstringisystaxizetibbletidyselecttriebeardurltoolsutf8vctrsveganviridisLiteWikipediRwikitaxawithrworrmsXMLxml2zoo